61 questions · 22 almanac · 7 findings

Plant Biology

The physiology, growth, and biochemistry of plants.

Almanac Magnesium at the Heart of the Leaf
  • What method did Willstätter use to work out the structure of chlorophyll without modern spectroscopy?
  • How is chlorophyll's porphyrin ring structurally related to haemoglobin?
  • Why does chlorophyll use magnesium at its centre instead of the iron that haemoglobin relies on?
  • What is the difference between chlorophyll-a and chlorophyll-b?
Almanac Iron for Blood, Magnesium for Light
  • What experimental steps let Willstätter's team identify chlorophyll's porphyrin ring and central magnesium ion using only 1910s chemistry?
  • What function does the phytol tail serve in anchoring chlorophyll within a cell membrane?
  • Why do plants use magnesium to capture light while animals use iron to carry oxygen?
  • How did Willstätter's structural map of chlorophyll enable later research into the electron transport chain of photosynthesis?
Almanac Air Into Bread, Air Into Gas
  • How does the Haber-Bosch process turn atmospheric nitrogen into ammonia for fertiliser?
  • Why was the world's nitrogen supply running out before Haber's process existed?
Almanac Air, Pressed Until It Fed Us
  • Why was nitrogen in the atmosphere unusable to crops despite making up eighty percent of the air?
  • In what sense did the Haber-Bosch process end up inside the bodies of most people alive today?
Almanac The Thirteen-Step Path From Air to Sugar
  • How did Melvin Calvin use radioactive carbon-14 pulses in algae to trace the path of carbon through photosynthesis?
  • What are the main stages of the Calvin cycle, from carbon dioxide fixation to sugar production and regeneration of the acceptor molecule?
  • Why did stopping the reaction after fractions of a second matter for identifying the cycle's intermediate compounds?
  • Why is understanding the Calvin cycle considered essential to thinking about atmospheric carbon and food supply today?
Almanac Shorter Stalks, Hundreds of Millions Fed
  • Why did Norman Borlaug breed wheat with shorter stems, and how did that prevent crop collapse?
  • How did Borlaug's wheat varieties resist the rust fungi that had historically devastated harvests?
  • How much did wheat production in India and Pakistan change after adopting Borlaug's varieties in the late 1960s?
Almanac Breeding the Heat Out of a Jalapeño
  • Why does capsaicin deter mammals from eating peppers while leaving birds unaffected?
  • How did Paul Bosland selectively breed capsaicin out of the jalapeño while keeping its shape and flavour?
Almanac A Rosetta Stone Disguised as a Weed
  • Why did plant biologists choose Arabidopsis thaliana as a model organism?
  • What made Arabidopsis the first plant genome to be fully sequenced, in December 2000?
  • How did sequencing Arabidopsis open the door to studying traits like drought tolerance?
Almanac Reading a Carrot Its Rights
  • What does the Swiss constitutional clause on the 'dignity of living things' actually require regarding plants?
  • How did the Swiss Federal Ethics Committee reason through what it might mean to morally wrong a plant?
Almanac A Vine That Copies Plastic Leaves
  • How does Boquila trifoliolata normally mimic the leaves of the living host plants it grows near?
  • What happened when researchers presented the vine with artificial plastic plants instead of real ones?
  • Why is the mechanism behind the vine's mimicry of plastic leaves still unexplained?
Finding Auxin transport model for leaf venation
  • How can a graph-based model of auxin transport, with non-polar (undirected) membrane edges, still produce directional vein patterns in a leaf?
  • What is the role of positive feedback between auxin flux and transport capacity in stabilizing vein channels during leaf venation?
  • How does modeling cells as graph nodes and intercellular membranes as unoriented edges allow branching vein patterns to emerge from a single auxin source-sink pair?
Finding Mathematical Modelling of Auxin Transport in Plant Tissues: Flux meets Signalling and Growth
  • How does feedback between PIN transporter regulation and auxin-responsive ARF-Aux/IAA signalling drive the switch between passage and spot patterns of auxin distribution?
  • What mathematical mechanism produces the 'reverse-fountain' auxin flow pattern observed at plant root tips?
  • How does cell growth interact with PIN polarisation to shape auxin distribution patterns in plant tissue?
  • What causes isolated cells to exhibit oscillatory dynamics in auxin signalling pathway components, and how does this relate to observed oscillations in ARF target gene expression?
Finding Hydromechanical field theory of plant morphogenesis
  • How does treating plant tissue as a poromorphoelastic medium explain the coupling between water absorption and cell wall expansion during growth?
  • Why do growing regions of a plant tissue behave as hydraulic sinks, and what non-local effects does this create across the tissue?
Finding Modeling the emergence of polarity patterns for the intercellular transport of auxin in plants
  • What causes individual plant cells to spontaneously polarize their PIN transporters without an external directional cue?
  • How does flux sensing, rather than concentration sensing, explain how cells detect and respond to auxin transport?
  • Why can ordered, tissue-wide auxin transport patterns emerge without a pre-existing auxin concentration gradient?
  • What role does molecular noise play in helping cells establish coordinated PIN polarization across a tissue?
Finding Reaction-Diffusion Pattern in Shoot Apical Meristem of Plants
  • How does the WUS-CLV feedback system generate the overlapping molecular gradients that define distinct zones within the shoot apical meristem?
  • What mechanism allows the shoot apical meristem to maintain a stable size over time despite developmental perturbations?
  • Why do the authors argue that reaction-diffusion dynamics are indispensable, rather than merely one possible explanation, for shoot apical meristem development?
Finding Synthetic genetic circuits as a means of reprogramming plant roots
  • What kinds of root architecture changes, such as branching patterns, root angles, and growth rates, can be predictably engineered using synthetic genetic circuits?
  • How could engineering root systems with programmable genetic circuits improve crop water and nutrient uptake under climate change?